Our team studies the translocation of ions and other solutes across cell membranes. Unicellular and multicellular models are used to evaluate the links between transport, metabolism and physiology, with a particular interest in the mechanisms and interactions regulating transmembrane ammonium movements. Ammonium is ubiquitous in nature and has a general importance. It is a principal nitrogen source for micro-organisms and plants, and a cytotoxic metabolite of most animal cells. Sophisticated detoxification and elimination pathways have been developed during evolution to prevent its excessive accumulation. The projects of the Biology of Membrane Transport Laboratory address the role of Mep-Amt-Rhesus transport proteins in different study models.
Deciphering the mechanisms and the signaling pathways involved in the activity regulation of eukaryotic Mep-Amt-Rh members remained an open field. We showed for the first time that, in yeast, the conserved TORC1 complex, controlling cell growth, is able to directly control ammonium permeability in a fast and flexible response to environmental perturbation. We highlight a mechanism involving a phosphorylation/dephosphorylation balance of a serine residue (S457) in an auto-inhibitory domain of the C-terminus of Mep2, fine-tuning its transport activity. The TORC1 effector kinase Npr1 and the two phosphatases Psr1 and Psr2 control this phosphorylation balance.
We further identified a conserved signaling protein Npr2, a tumor suppressor in humans, transmitting the nitrogen signal to TORC1. Moreover, in a work
published in 2015 in PLOS Genetics, we showed that TORC1-Npr1 regulates the inherent activity of the remaining yeast Mep1 and Mep3 ammonium transport proteins by a different process. It involves the phospho-silencing of an intermediate negative regulator Amu1/Par32, a functional orphan, able to directly inhibit Mep1 and Mep3.
A subfamily of yeast Mep-Amt-Rh proteins acts as both transporters and sensors, the sensing function being required to signal fungal filamentous growth. Our work reveals a tight connection between the ammonium translocation process and the signaling function.
In mammalian cells, we identified ammonium as a novel dose-dependent signal mediating rapid activation of the highly conserved mTORC and further the regulation of mTORC1.
We use yeast as an expression tool to test the ammonium transport function of proteins of different organisms, from bacteria to humans. For instance, human and C.elegans Rhesus (Rh) proteins are able to transport ammonium in yeast.
We also test the function of the human Rhesus proteins and the associated polymorphisms.
Defects in Rhesus factors are so far related to known human pathologies affecting red blood cells, kidney function and male fertility. Ongoing studies in the laboratory are seeking to identify new connections linking Rhesus factors dysfunction and human diseases, with a specific concern for a potential role of these proteins in ammonium homeostasis and pH regulation of physiological fluids. By investigating the biogenesis, structure, trafficking, kinetics and regulation of these transport proteins, we hope to advance our understanding of these disorders with the prospect of potential therapeutic interventions.
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